This folder contains data and replication code for the calculations contained in the article: Stephanie Holmes Didwania, "Regressive White-Collar Crime," 97 Southern California Law Review (2024).
Our mission is to create and foster a diverse community of intellectual engineers and scientists by providing the necessary education and resources to have fun inventing quantum activities. Also, to share knowledge and excitement while interacting with quantum machines and concepts. We envision developing device abstraction concepts and human-machine interfaces...
Peak-alpha frequency varies across individuals and mental states, but it also forms a negative gradient from posterior to anterior regions in association with increases in cortical thickness and connectivity reflecting the cortical hierarchy in temporal integration. Tracking the spatial standard deviation of peak-alpha frequency in scalp EEG, we observed that...
Data in support of the manuscript titled "Humans Exploit the Trade-Off Between Mediolateral Stability and Manoeuvrability During Walking".
Abstract:
People use the mechanical interplay between stability and manoeuvrability to successfully walk. During single limb support, body states (position and velocity) that increase lateral stability will inherently resist lateral manoeuvres, decrease...
Stochastic simulations showing differential dependence of gene regulatory network dynamics on auxiliary promoters and repressors of gene expression between varied metabolic conditions.
This data was used to compare the performance of a urine point-of-care assay and interviewer-administered timeline follow-back to the gold-standard for measuring recent and longer-term adherence of pre-exposure prophylaxis (PrEP) in dried blood spots (DBS). This data was used to produce the research findings presented in the peer-reviewed journal cited...
Data for manuscript submission to PLoS ONE entitled:
Prior Uncertainty Impedes Discrete Locomotor Adaptation
Authors:
Jiang, Aojun
Grover, Francis M.
Bucklin, Mary
Deol, Jasjit
Shafer, Anna
Gordon, Keith E.
Data and Fortran code for Figures 2 and 3 of "Phase Separation and Ripening in a Viscoelastic Gel" by Tine Curk and Erik Luijten, Proc. Nat. Acad. Sci (2023).
Manuscript available at arXiv:2305.10226
Abstract:
In this study we will show a new method of polishing for Nb3Sn cavities known as centrifugal barrel polishing (CBP). Using this method, Nb3Sn coated samples are polished to a surface roughness comparable to a traditional Nb cavity after electropolishing (EP). We also investigate different...
A noncomprehensive list of large urban fires in the 1850s United States. All fires were large enough to destroy 20 structures or do $200,000 in damage (in 1850s dollars). Some fires are included on the basis of verbal descriptions (e.g., "downtown destroyed") that suggest that the fires were of this...
# Brazil bus transportation data and US domestic air transportation network data:
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Temporal network transportation data with monthly resolution.
The Brazilian inter-cities bus data was collected from the Brazilian National Land Transportation Agency ([ANTT]( https://antt.gov.br.)). The dataset contains all inter-cities bus transportation from January 2005 to December 2014 with monthly...
Cell state transitions are often triggered by large changes in the
concentrations of transcription factors and therefore large differences
in their stoichiometric ratios. Whether cells can elicit transitions using
modest changes in the ratios of co-expressed factors is unclear. Here,
we investigate how cells in the Drosophila eye resolve state...
Gene expression is a regulated process that is driven by ATP consumption. Therefore, regulation must be coupled to constraints imposed by the level of energy metabolism. Here, we explore this relationship both theoretically and experimentally. A mathematical model predicts that activators of gene expression have variable impact depending on metabolic...
Learning to discriminate between different sensory stimuli is essential for survival. In rodents, the olfactory bulb, which contributes to odor discrimination via pattern separation, exhibits extensive structural synaptic plasticity involving the formation and removal of synaptic spines, even in adult animals. The network connectivity resulting from this plasticity is...
Included in this submission are the following supplementary materials that were unable to be included in the article, but the authors would like to make available for other researchers:
● Raw data csv files and R analysis code
● Supplemental graphs
● Full bibliography
● Sources of Materials document
●... and Below is the abstract for the forthcoming Book and Paper Group Annual article at the time of this submission.
Rigid polysaccharide gels are a vital area of research for library and paper conservation, as they are still a relatively new material in the field. This experiment investigates anecdotal concerns of...
This collection of csv files contains information from the internet movie database (IMDb; imdb.com), which can be packaged into a database for example problems. The files have been put together in support of exercises for the LSSTC DSFP.
The data were collected from the website: https://relational.fit.cvut.cz/dataset/IMDb
This data set was curated as part of an exercise for the LSSTC Data Science Fellowship Program (DSFP).
Some of the data are sourced from the Sloan Digital Sky Survey (SDSS; sdss.org).
Geogenic fluoride contaminates the water of tens of millions of people. However, many are unaware of the fluoride content due in part to shortcomings of detection methods. Biosensor tests are a relatively new approach to water quality testing that address many of these shortcomings but have never been tested by...
Pediatric participants performed a series of trials that involved stepping up onto a raised platform. Body weight load was modulated during this task from -20% to +15% in 5% increments (excluding -5%). Outcome measures include peak hip abduction moments, peak support moments, and individual hip, knee, and ankle percent contributions...
ARTICLE 3: TITLE. A phase-shifting anterior-posterior network organizes global phase relations. ABSTRACT. Prior research has identified a variety of task-dependent networks that form through inter-regional phase-locking of oscillatory activity that are neural correlates of specific behaviors. Despite ample knowledge of task-specific functional networks, general rules governing global phase relations have..., ARTICLE 1: TITLE. Probabilistic, entropy-maximizing control of large-scale neural synchronization.
ABSTRACT. Oscillatory neural activity is dynamically controlled to coordinate perceptual, attentional and cognitive processes. On the macroscopic scale, this control is reflected in the U-shaped deviations of EEG spectral-power dynamics from stochastic dynamics, characterized by disproportionately elevated occurrences of the..., and ARTICLE 2: TITLE. Spatiotemporal dynamics of maximal and minimal EEG spectral power.
ABSTRACT. Oscillatory neural activities are prevalent in the brain with their phase realignment contributing to the coordination of neural communication. Phase realignments may have especially strong (or weak) impact when neural activities are strongly synchronized (or desynchronized) within...
"Abstract
Purpose: Research establishes the critical need to address the underrepresentation of women and racial/ethnic minorities in science, technology, engineering, and mathematics (STEM). While emergent research addresses similar challenges for sexual and gender minorities (SGM), this research remains scant and focuses on adult experiences. This analysis examines subgroup differences and... and ARCH Deposit Description:
Citation: Xavier Hall, C.D., Wood, C., Hurtado, M., BA, Moskowitz, D., Dyar, C., Mustanski, B., Identifying leaks in the STEM recruitment pipeline among sexual and gender minority secondary students: bullying, self-concept, perceived climate, and STEM intentions. PLOS ONE. (In Press)
Lichess is an online chess platform where players can play against each other in different rating brackets. Our idea was to visualize the chess opening hierarchy by experience level on the Lichess platform catered to beginner to advanced chess players. Chess openings are specific sequences of moves played by both...
Different cancers are dependent on distinct genes for their survival. The Broad institute previously ran assays on cancer cell lines that knocked out individual genes. Cell survival was subsequently measured to discover what genes were most essential to cancer survival. This dashboard uses the “essentiality” scores produced from these assays...
The ability of a cell to regulate its mechanical properties is central to its function. Emerging evidence suggests that interactions between the cell nucleus and cytoskeleton influence cell mechanics through poorly understood mechanisms. Here we conduct quantitative confocal imaging to show that loss of A-type lamins tends to increase nuclear...
These data are packaged as a "tarball" which includes main files. There are two main files:
training_sources.csv – list of sources in the training_lcs/ folder, including name, classification, mean mag, total number of observations, and duration of observations
test_sources.csv –list of sources in the test_lcs/ folder, including name, classification, mean...
This data set includes photometric features as measured by the Sloan Digital Sky Survey (SDSS; sdss.org) that can be used as a training set in a machine learning model to separate galaxies and stars. It is used as part of a problem developed for the LSSTC Data Science Fellowship Program....
This data set was curated as part of an exercise for the LSSTC Data Science Fellowship Program (DSFP). The data are sourced from the Sloan Digital Sky Survey (SDSS; sdss.org).
The following query of the SDSS database was used to select these data (note - use of "TOP" in the...
Abstract A significant component of the repetitive dynamics during locomotion in vertebrates is generated within the spinal cord. The legged locomotion of mammals is most likely controled by a hierarchical, multi-layer spinal network structure, while the axial circuitry generating the undulatory swimming motion of animals like lamprey is thought to...
Circadian rhythms — physiological, behavioral, and metabolic oscillations with an approximate 24-h period — are controlled by an evolutionarily conserved set of core clock genes operating at the transcriptional and protein level. Entrainable by Zeitgebers (external environmental stimuli such as light, temperature, and food) that modulate time-of-day specific functions, the...
This data was a part of a REDCap survey opened from 5/6/2020 to 7/7/2020. Potential participants with cerebral palsy and their families voluntarily responded to various questions about the motivators, barriers, and goals associated with the decision to participate in cerebral palsy research. Included in this work are the dataset...
Throughout the last two decades several scholars observed that present-day research into human genes rarely turns toward genes that had not already been extensively investigated in the past. Guided by hypotheses derived from studies of science and innovation, we present here a literature-wide data-driven meta-analysis to identify the specific scientific...
This is the raw data for an article in the process of being published. The article's abstract is: There is evidence suggesting that during walking the whole body center-of-mass (COM) trajectory may be a control objective, a goal that the central nervous system chooses optimal solutions around to plan and...
Background: Neural impairments that follow hemiparetic stroke may negatively affect passive muscle properties, further limiting recovery. However, factors such as hypertonia, spasticity, and botulinum neurotoxin (BoNT), a common clinical intervention, confound our understanding of muscle properties in chronic stroke.
Objective: To determine if muscle passive biomechanical properties are different following...
Astronomers are studying how young stellar objects (YSOs) develop and accrete mass. The variability of the YSO brightness can give information about the rate of accretion and the growth of these young stars. The YSOs described in this project are found in the Large Magellanic Cloud, a galaxy nearby to...
My submission is a data dashboard that depicts global trends for new and total COVID-19 cases between Jan 01, 2020 and March 08, 2021. It contains two tabs (new and total cases) with three interactive visualizations. Two maps, an original and a log-scale-filled, show the number of new COVID-19 cases...
American communities of color have shouldered a disproportionate share of the COVID-19 pandemic’s burden. For instance, at peak, Hispanic/Latino Americans experienced a weekly all-cause death burden 130.9% in excess of previous years. Not all excess deaths are directly attributable to COVID-19—there is emerging evidence that delays in care associated with...
The data file contains federal criminal cases as observations and case attribute variables. This data file is the basis for the article Discretion and Disparity in Federal Detention, 115 Nw. U. L. Rev. 1261 (2021), available at: https://scholarlycommons.law.northwestern.edu/nulr/vol115/iss5/1/. This data file is created with data from the U.S. Sentencing Commission...
Readme for Federal Circuit data file created by Melissa F. Wasserman and Jonathan D. Slack. The data file contains Federal Circuit opinions in each row and case/opinion attributes on the columns. The data file covers opinions issued from 10.13.2004 through 1.30.2018. This data file is the basis for the article...
Patients with sickle cell disease (SCD) experience lifelong struggles with both chronic and acute pain, often requiring medical intervention. Pain can be managed with medications, but dosages must balance the goal of pain mitigation against the risks of tolerance, addiction and other adverse effects. Setting appropriate dosages requires knowledge of...
Metabolic conditions affect the developmental tempo of most animal species. Consequently, developmental gene regulatory networks (GRNs) must faithfully adjust their dynamics to a variable time scale. We find evidence that weak repressors of gene expression provide the necessary coupling between GRN output and cellular metabolism. Using a mathematical model that...
Spatiotemporal dynamics of EEG/MEG (electro-/magneto-encephalogram) have typically been investigated by applying time-frequency decomposition and examining amplitude-amplitude, phase-phase, or phase-amplitude associations between combinations of frequency bands and scalp sites, primarily to identify neural correlates of behaviors and traits. Instead, we directly extracted global EEG spatiotemporal dynamics as trajectories of k-dimensional state...
In the early decades of the NAES College library, librarians kept a physical card catalog which described, organized, and made findable all of the materials faculty, students, staff, and their relations might need as part of their experience at the college. Representing a unique view of the library in the...
Soil texture has important ramifications on the shape and size of roots as well as impacting how much water is taken up and the distribution of nutrients in the soil. These factors lead to differences in growth characteristics and plant performance. However, what traits and how the plant responds to...
There is growing evidence that growth with invasive species influences the traits of co-occurring native plants over multiple generations. Some studies indicate that these experienced populations perform better in the presence of the invasive species that led to the trait changes. These experienced populations could serve as source material for...
Understanding how root traits vary within a species and how traits respond to heterogeneous environments, can provide important insight into functional plant attributes that influence plant survival in competitive environments. Selecting plant material with root traits that will support its survival in heterogenous environments may help improve the outcomes of...
Restoration practitioners have many seed material choices when restoring plant communities, and for some species, cultivars may be the most affordable and accessible material available. However, the process of plant selection and commercial seed production can limit trait variability critical to survival and persistence in heterogeneous environments. Several studies have...
The custom of voluntarily tipping for services rendered has gone in and out of fashion in America since its introduction in the 19th century. Restaurant owners that ban tipping in their establishments often claim that social justice drives their decisions, but we show that rational profit-maximization may also justify the...
Advances in biosensor engineering have enabled the design of programmable molecular systems to detect a range of pathogens, nucleic acids, and chemicals. Here, we engineer and field-test a biosensor for fluoride, a major groundwater contaminant of global concern. The sensor consists of a cell-free system containing a DNA template that...
In many dryland environments, vegetation self-organizes into bands that can be clearly identified in remotely-sensed imagery. The status of individual bands can be tracked over time, allowing for a detailed remote analysis of how human populations affect the vital balance of dryland ecosystems. In this study, we characterize vegetation change...
Recent advances in cell-free gene expression (CFE) systems have enabled their use for a host of synthetic biology applications, particularly for rapid prototyping of genetic circuits and biosensors. Despite the proliferation of cell-free protein synthesis platforms, the large number of currently existing protocols for making CFE extracts muddles the collective...
A longstanding goal of synthetic biology has been the programmable control of cellular functions. Central to this is the creation of versatile regulatory toolsets that allow for programmable control of gene expression. Of the many regulatory molecules available, RNA regulators offer the intriguing possibility of de novo design – allowing...
These files include source datasets for the article "Multipartite stabilization of the C. beijerincki pfl ZTP aptamer disfavors terminator hairpin folding by gating strand invasion". RELATED ARTICLE: Strobel, E.J., Cheng, L., Berman, K.E. et al. A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control. Nat Chem Biol 15, 1067–1076...
MANUSCRIPT ABSTRACT:
The analysis of citations to scientific publications has become a tool in the evaluation of a researcher’s work, especially due to an ever-increasing production volume. Despite its acknowledged shortcomings and the ongoing debate on their meaning, citations are still primarily viewed as endorsements and as indicators of the...
Related article: McGrath, M.C., Gerber, A.S. Experimental evidence for a pure collaboration effect. Nat Hum Behav 3, 354–360 (2019) doi:10.1038/s41562-019-0530-9
This file contains the supplementary online material that should accompany the paper "Defining and Measuring the Influences of GIS-Based
Instruction on Students’ STEM-Relevant Reasoning", published in Journal of Geography.
This dissertation provides a study of local Black media development in Detroit in the decade following the 1967 Rebellion, as Detroit became a majority Black city. I argue that Black Detroiters not only produced documentaries that challenged local white discourse within what George Lipsitz terms “a Black spatial imaginary,†but...
Reactive Nitrogen (N) and phosphorus (P) pollution is responsible for a vast array of environmental problems, including eutrophication of nutrient limited water bodies, vast dead zones in the ocean margins, and ammonia toxicity to aquatic life. N pollution is also linked to the emission of the potent greenhouse gas nitrous...
Importance: Despite its efficacy, low tidal volume ventilation (LTVV) remains severely underutilized for patients with acute respiratory distress syndrome (ARDS). Physician under-recognition of ARDS is a significant barrier to LTVV use. We propose a computational method that addresses some of the limitations of the current approaches to automated measurement of...
To aid in the successful execution of goal-directed walking (discrete movement from a start location to an end target) the central nervous system forms a predictive motor plan. For the motor plan to be effective, it must be adapted in response to environmental changes. Despite motor planning being inherent to...
Data files for the Chicago Historical Homicide Project. The Chicago Historical Homicide Project began with the discovery of the availability of a rich log of more than 11,000 homicides maintained consistently and without interruption by the Chicago Police Department over the course of 60 years, from 1870 to 1930. The...
In May 2018, the US Food and Drug Administration approved daily oral pre-exposure prophylaxis (PrEP) for adolescents under age 18. Although this is an important step toward HIV prevention for adolescents assigned male at birth who have sex with males (AMSM), limited research exists to gauge their awareness of PrEP...
MANUSCRIPT ABSTRACT:
Socially relevant situations that involve strategic interactions are widespread among animals and humans alike. To study these situations, theoretical and experimental research has adopted a game theoretical perspective, generating valuable insights about human behavior. However, most of the results reported so far have been obtained from a population...
The ideology scores of US Congress members over time, quantified from how similarly they voted on bills. I present an interactive visualization for the US Congress members’ ideology. The data used are ideology scores of US Congress members 1789-2015. The ideology scores are quantified from the Congress members’ voting records...
Traditional bottom-up mass spectrometry-based proteomics relies on the use of an enzyme, often trypsin, to generate small peptides (typically < 25 amino acids long). In top-down proteomics, proteins remain intact and are directly measured within the mass spectrometer. This technique, while inherently simpler than bottom-up proteomics, generates data which must...
Nearly a quarter of visits to the Emergency Department are for conditions that could have been managed via outpatient treatment; improvements that allow patients to quickly recognize and receive appropriate treatment are crucial. The growing popularity of mobile technology creates new opportunities for real-time adaptive medical intervention, and the simultaneous...
These datasets include all raw data, corrected data, and correction calculations for the sapling height, statistical tests and mycorrhizal morphological analysis data analyzed during the experimental work.
This collection includes all of the supplemental figures that were not included in the thesis document. (Isotopic, Mycorrhizal Morphology and Temperature)